Real-time systems refinement : application to the verification of web services

Les services Web sont des applications distribuées qui sont conçus pour atteindre une tâche spécifique de l'entreprise sur le web. Afin d'augmenter la qualité et d'élever la sécurité des services Web, la vérification de BPEL, un service web langage de composition est considérée. Dans ce contexte, le model checking est une des techniques de vérification les plus utilisés en raison de son exhaustivité, son application facile et automatique. Cependant, un inconvénient majeur du model checking est l'explosion combinatoire en cas de grands modèles. Le raffinement est une des techniques utilisées pour combattre au problème d'explosion. Dans cette thèse, nous étudions le raffinement des systèmes temporisés et son application à des situations réelles, à savoir les modèles BPEL. Pour cela, nous proposons d'abord une technique automatique pour la vérification de la simulation faible temporisée entre des systèmes de transitions temporisé basée sur des modèles issus d'un langage de spécification formelle, FIACRE. La technique est une méthode basée sur l'observation, dans laquelle deux systèmes de transitions temporisés sont composées avec un observateur temporisé. Une propriété de mu-calcul qui capte la simulation faible temporisée est ensuite vérifiée sur le résultat de la composition. En deuxième étape, afin de valider les modèles BPEL, nous proposons une technique qui consiste dans les étapes suivantes: premièrement, les activités BPEL qui ont besoin d'être abstrait sont fournis avec leurs abstractions. Deuxièmement, la source BPEL est transformé en FIACRE en fonction des choix précédents. Troisièmement, les propriétés d'exigences sont vérifiées sur le modèle de FIACRE abstrait. Enfin, les relations de simulation sont prouvés entre les composants concrets et abstraits du modèle.Web services are distributed applications which are designed to achieve a specific business task over the web. In order to increase the security and to elevate the safety of web services, the verification of BPEL, a web services composition language is considered. In this context, model checking is one of the most used verification techniques because of its thoroughness, its easy application, and automatic approach. However, a major drawback of model checking is the combinatory explosion in case of large models. Refinement is one of the used techniques to alleviate the model checking problem. In this PhD, we study the refinement of timed systems and its application to real life scenarios, namely to BPEL models. For this, we first suggest an automatic technique for checking the timed weak simulation between timed transition systems based on models originating from a formal specification language, FIACRE. The technique is an observation-based method in which two timed transition systems are composed with a timed observer. A $\mu$-calculus property that captures the timed weak simulation is then verified upon the result of the composition. At the second stage, in order to validate BPEL models, we suggest a technique that consists in the following steps : first, BPEL activities to-be-abstracted are provided along with their abstractions. Second, the BPEL source is transformed to FIACRE according to the previous choices. Third, domain properties are verified on the abstract FIACRE model. Finally, simulation relations are proven between concrete and abstract parts of the model

An Automatic Technique for Checking the Simulation of Timed Systems

International audienceIn this paper, we suggest an automatic technique for checking the timed weak simulation between timed transition systems. The technique is an observation-based method in which two timed transition systems are composed with a timed observer. A μ-calculus property that captures the timed weak simulation is then verified on the result of the composition. An interesting feature of the suggested technique is that it only relies on an untimed μ-calculus model-checker without any specific algorithm needed to analyze the result of the composition. We also show that our simulation relation supports interesting results concerning the trace inclusion and the preservation of linear properties. Finally, the technique is validated using the FIACRE/TINA toolset

Reliability of low‐power cycling efficiency in energy expenditure phenotyping of inactive men and women

Standardized approaches to assess human energy expenditure (EE) are well defined at rest and at moderate to high‐intensity exercise, but not at light intensity physical activities energetically comparable with those of daily life (i.e., 1.5–4 times the resting EE, i.e., 1.5–4 METs). Our aim was to validate a graded exercise test for assessing the energy cost of low‐intensity dynamic work in physically inactive humans, that is, those who habitually do not meet the guidelines for moderate‐to‐vigorous aerobic physical activity levels. In healthy and inactive young men and women (n = 55; aged 18–32 years), EE was assessed in the overnight‐fasted state by indirect calorimetry at rest and during graded cycling between 5 and 50W for 5 min at each power output on a bicycle ergometer. Repeatability was investigated on three separate days, and the effect of cadence was investigated in the range of 40–90 rpm. Within the low power range of cycling, all subjects perceived the exercise test as “light” on the Borg scale, the preferred cadence being 60 rpm. A strong linearity of the EE‐power relationship was observed between 10 and 50 W for each individual (r > 0.98), and the calculation of delta efficiency (DE) from the regression slope indicated that DE was similar in men and women (~29%). DE showed modest inter‐individual variability with a coefficient of variation (CV) of 11%, and a low intra‐individual variability with a CV of ~ 5%. No habituation or learning effect was observed in DE across days. In conclusion, the assessment of the efficiency of low power cycling by linear regression – and conducted within the range of EE observed for low‐intensity movements of everyday life (1.5–4 METs) – extends the capacity for metabolic phenotyping in the inactive population

Issues in continuous 24-H core body temperature monitoring in humans using an ingestible capsule telemetric sensor

Background: There is increasing interest in the use of pill-sized ingestible capsule telemetric sensors for assessing core body temperature (Tc) as a potential indicator of variability in metabolic efficiency and thrifty metabolic traits. The aim of this study was to investigate the feasibility and accuracy of measuring Tc using the CorTemp® system.Methods: Tc was measured over an average of 20 h in 27 human subjects, with measurements of energy expenditure made in the overnight fasted state at rest, during standardized low-intensity physical activity and after a 600 kcal mixed meal. Validation of accuracy of the capsule sensors was made ex vivo against mercury and electronic thermometers across the physiological range (35–40°C) in morning and afternoon of 2 or 3 consecutive days. Comparisons between capsule sensors and thermometers were made using Bland–Altman analysis. Systematic bias, error, and temperature drift over time were assessed.Results: The circadian Tc profile classically reported in free-living humans was confirmed. Significant increases in Tc (+0.2°C) were found in response to low-power cycling at 40–50 W (~3–4 METs), but no changes in Tc were detectable during low-level isometric leg press exercise (<2 METs) or during the peak postprandial thermogenesis induced by the 600 kcal meal. Issues of particular interest include fast “turbo” gut transit with expulsion time of <15 h after capsule ingestion in one out of every five subjects and sudden erratic readings in teletransmission of Tc. Furthermore, ex vivo validation revealed a substantial mean bias (exceeding ±0.5°C) between the Tc capsule readings and mercury or electronic thermometers in half of the capsules. When examined over 2 or 3 days, the initial bias (small or large) drifted in excess of ±0.5°C in one out of every four capsules.Conclusion: Since Tc is regulated within a very narrow range in the healthy homeotherm’s body (within 1°C), physiological investigations of Tc require great accuracy and precision (better than 0.1°C). Although ingestible capsule methodology appears of great interest for non-invasively monitoring the transit gut temperature, new technology requires a reduction in the inherent error of measurement and elimination of temperature drift and warrants more interlaboratory investigation on the above factors

Combining acetabular and femoral morphology improves our understanding of the down syndrome hip.

Background: Hip instability is frequent in patients with Down syndrome. Recent studies have suggested that skeletal hip alterations are responsible for this instability; however, there are currently no studies simultaneously assessing femoral and acetabular anatomy in subjects with Down syndrome in the standing position. The aim was to analyze the three-dimensional anatomy of the Down syndrome hip in standing position. Methods: Down syndrome subjects were age and sex-matched to asymptomatic controls. All subjects underwent full body biplanar X-rays with three-dimensional reconstructions of their pelvises and lower limbs. Parameter means and distributions were compared between the two groups. Findings: Forty-one Down syndrome and 41 control subjects were recruited. Acetabular abduction (mean=52° [SD=9°] vs. mean=56° [SD=8°]) and anteversion (mean=14° [SD=8°] vs. mean=17.5° [SD=5°]) as well as posterior acetabular sector angle (mean=91° [SD=7°] vs. mean=94° [SD=7°]) were significantly lower in Down syndrome subjects compared to controls (P < 0.01). Anterior acetabular sector angle (mean=62° [SD=10°] vs. mean=59° [SD=7°]; P < 0.01) was significantly higher in Down syndrome compared to controls. The distributions of acetabular anteversion (P=0.002;V=0.325), femoral anteversion (P=0.004;V=0.309) and the instability index (P < 0.001;V=0.383) were significantly different between the two groups, with subjects with Down syndrome having both increased anteversion and retroversion for each of these parameters. Interpretation: Subjects with Down syndrome were found to have a significantly altered and more heterogeneous anatomy of their proximal hips compared to controls. This heterogeneity suggests that treatment strategies of hip instability in Down syndrome should be subject-specific and should rely on the understanding of the underlying three-dimensional anatomy of each patient.This research was funded by the University of Saint-Joseph (grant# FM183). The authors did not receive any external funding for this stud

Influence of patient rotational malpositioning on pelvic parameters assessed on lateral radiographs

Aim: To estimate the effect of patients' axial rotation (AR) during pelvic radiograph acquisition, on the reliability and validity of sagittal pelvic parameters. Materials and methods: Lateral digitally reconstructed radiographs (LDRRs) were obtained from the pelvic computed tomography (CT) scans of eight children and nine adults. Then, the AR of the pelvis was simulated and the corresponding LDRRs were reconstructed at 5°, 10°, 15°, and 20° of the AR. Pelvic parameters were measured digitally on each radiograph. Intra- and interobserver variability were evaluated at each AR position (three operators repeated the measurements three times each). The bias on each clinical parameter, in each AR position, was calculated relatively to the 0° position. Results: Interobserver variability increased similarly in children and adults with AR. It reached 4.4° for pelvic incidence and 4.7° for the sacral slope at 20° of AR. Biases on radiological parameters increased with AR and exceeded the acceptable threshold of errors when AR reached 10°. A linear regression was established (R2=0.834, p<0.0001) in order to estimate the AR of a patient on a lateral pelvic radiograph based on the measurement of the bifemoral distance normalized to the sagittal pelvic thickness. Conclusions: AR of patients during radiograph acquisition can be estimated in clinical practice, which would allow physicians to discard any radiographs where the calculated AR exceeded 10°

Validity and reliability of different techniques of neck–shaft angle measurement

AIM: To determine a valid and reliable neck-shaft angle (NSA) measurement method while rotating the pelvises in increments of 5° in order to simulate patient malpositioning. MATERIALS AND METHODS: CT images of 17 patients were used to produce digitally reconstructed radiographs in frontal and lateral views and three-dimensional (3D)-reconstructions of the femurs, considered to be the reference standard. Malpositioning was simulated by axially rotating the frontal radiographs from 0° to 20°. Three operators measured in two-dimensions the NSA using four different methods, three times each, at each axial rotation (AR) position. Method 1 (femoral neck axis drawn by joining the centre of the femoral head (CFH) to the median of the femoral neck base; femoral diaphysis axis drawn by joining the median of two lines passing through the medial and lateral edges of the femoral axis below the lesser trochanter) and method 2 (femoral axis taken as the median of a triangle passing through base of femoral neck and medial and lateral head-neck junction; femoral diaphysis as previous) were described for the first time; method 3 was based on a previous study; method 4 was a free-hand technique. Reliability, validity, and global uncertainty were assessed. RESULTS: Method 1 showed the best reliability and validity. The global uncertainty also showed minimal values for method 1, ranging from 7.4° to 14.3° across AR positions. CONCLUSION: Method 1, based on locating the CFH, was the most reliable and valid method and should be considered as a standardised two-dimensional NSA measurement method for clinical application

Cabbage and fermented vegetables : From death rate heterogeneity in countries to candidates for mitigation strategies of severe COVID-19

Large differences in COVID-19 death rates exist between countries and between regions of the same country. Some very low death rate countries such as Eastern Asia, Central Europe, or the Balkans have a common feature of eating large quantities of fermented foods. Although biases exist when examining ecological studies, fermented vegetables or cabbage have been associated with low death rates in European countries. SARS-CoV-2 binds to its receptor, the angiotensin-converting enzyme 2 (ACE2). As a result of SARS-CoV-2 binding, ACE2 downregulation enhances the angiotensin II receptor type 1 (AT(1)R) axis associated with oxidative stress. This leads to insulin resistance as well as lung and endothelial damage, two severe outcomes of COVID-19. The nuclear factor (erythroid-derived 2)-like 2 (Nrf2) is the most potent antioxidant in humans and can block in particular the AT(1)R axis. Cabbage contains precursors of sulforaphane, the most active natural activator of Nrf2. Fermented vegetables contain many lactobacilli, which are also potent Nrf2 activators. Three examples are: kimchi in Korea, westernized foods, and the slum paradox. It is proposed that fermented cabbage is a proof-of-concept of dietary manipulations that may enhance Nrf2-associated antioxidant effects, helpful in mitigating COVID-19 severity.Peer reviewe

Nrf2-interacting nutrients and COVID-19 : time for research to develop adaptation strategies

There are large between- and within-country variations in COVID-19 death rates. Some very low death rate settings such as Eastern Asia, Central Europe, the Balkans and Africa have a common feature of eating large quantities of fermented foods whose intake is associated with the activation of the Nrf2 (Nuclear factor (erythroid-derived 2)-like 2) anti-oxidant transcription factor. There are many Nrf2-interacting nutrients (berberine, curcumin, epigallocatechin gallate, genistein, quercetin, resveratrol, sulforaphane) that all act similarly to reduce insulin resistance, endothelial damage, lung injury and cytokine storm. They also act on the same mechanisms (mTOR: Mammalian target of rapamycin, PPAR gamma:Peroxisome proliferator-activated receptor, NF kappa B: Nuclear factor kappa B, ERK: Extracellular signal-regulated kinases and eIF2 alpha:Elongation initiation factor 2 alpha). They may as a result be important in mitigating the severity of COVID-19, acting through the endoplasmic reticulum stress or ACE-Angiotensin-II-AT(1)R axis (AT(1)R) pathway. Many Nrf2-interacting nutrients are also interacting with TRPA1 and/or TRPV1. Interestingly, geographical areas with very low COVID-19 mortality are those with the lowest prevalence of obesity (Sub-Saharan Africa and Asia). It is tempting to propose that Nrf2-interacting foods and nutrients can re-balance insulin resistance and have a significant effect on COVID-19 severity. It is therefore possible that the intake of these foods may restore an optimal natural balance for the Nrf2 pathway and may be of interest in the mitigation of COVID-19 severity